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Introduction

Advancing immunology together

The Center for Immunology of Marseille-Luminy (CIML) brings together 16 research teams covering all fields of modern immunology, from molecular biology to therapeutic applications. This diversity allows the CIML to address fundamental immunological questions while developing translational approaches for human health, positioning our institute as a major player in immunology research in France and Europe.

CIML teams are developing a comprehensive approach to immunology, combining the study of molecular mechanisms of cell recognition and signaling with the complex interactions between immune cells in different tissues. Research spans the development and differentiation processes of the immune system to pathological dysfunctions, particularly in the context of infections, inflammation, and cancer.

INNATE IMMUNITY

Innate immunity is a major focus of research at CIML, with teams dedicated to understanding the first lines of defense. This research covers the biology of dendritic cells and their role in antiviral defense, the immunobiology of inflammation, innate lymphoid cells, mucosal immunity, immune system development, central nervous system immunosurveillance, neuronal regulation of immunity, and stromal cell immunology.

ADAPTIVE IMMUNITY

Adaptive immunity is another major focus of research at CIML, with teams exploring specialized mechanisms of immune recognition and memory. This research includes T cell signaling and membrane dynamics, integrative B and T cell biology, immune tolerance mechanisms, B cell immunity to infections, analysis of adaptive repertoires, and the pathogenesis of lymphoid neoplasias.

This multi-scale and interdisciplinary approach allows for an in-depth understanding of immune responses and opens the way to new therapeutic strategies in human health.

Projects

Project
2025
Régulations neuro-immunes de la régénération cutanée

Les macrophages résidents des tissus jouent un rôle fondamental dans l’homéostasie tissulaire et sa régénération après lésion. Dans un modèle […]

Guillaume HOEFFEL
Project
2025
Sensory neurons and immune regulation

Beyond the pain perception processes that are induced in the event of injury or infection of the […]

Sophie UGOLINI
Project
2025
CLL-PID: Familial chronic lymphocytic leukemia and immune deficiencies

Dr. Pierre Milpied's team at CIML is participating in a collaborative project coordinated by Dr. Jean-Pierre de Villartay (Institut […]

Pierre MILPIED
Project
2025
AITLas-Impact: Deciphering the heterogeneity of angioimmunoblastic T-cell lymphomas

The AITLas-Impact project, coordinated by Pierre Milpied (CIML) in collaboration with Professor François Lemonnier (Mondor Institute of Biomedical Research, […]

Pierre MILPIED
Project
2025
ST-omics: Structuring regional expertise in spatial transcriptomics

The ST-omics structuring action of the Cancéropôle de la Région Sud is co-coordinated by Dr Pierre Milpied (CIML), Prof Emmanuelle […]

Pierre MILPIED
Project
2025
GCselection: Redefining the selection criteria for B lymphocytes in germinal centers

The GCselection project, coordinated by Dr. Pierre Milpied (CIML), revisits the mechanisms of antibody maturation in centers […]

Pierre MILPIED
Mauro GAYA
Project
2025
LUCA-pi: Immunogenomic biomarkers for the prevention and interception of lung cancer

The University Hospital Research (RHU) project LUCA-pi (Lung Cancer prevention and interception), coordinated by Professor David Boulate (AP-HM), aims […]

Pierre MILPIED
Project
2025
Spatial Omics Lymphomas: Multi-dimensional spatial analysis platform for lymphomas

The structuring action Spatial Omics of the CALYM consortium, coordinated by Dr Pierre Milpied, aims to develop a virtual platform dedicated […]

Pierre MILPIED
Project
2025
PLAIR: Deciphering the hepatic immune response in autoimmune diseases

The PLAIR project, coordinated by Dr Amédée Renand (CR2TI, Nantes), aims to identify the molecular pathways controlling the response […]

Pierre MILPIED
Project
2025
TCELL-CODE: Deciphering T cell activation through TCR stimulation dynamics

The TCELL-CODE project, coordinated by Dr. Rémy Lasserre at the Marseille Cancer Research Center, aims to elucidate […]

Pierre MILPIED
Guillaume VOISINNE
Project
2025
ANTIBAX: Neutralizing antibodies directed against pro-carcinogenic bacteria

The ANTIBAX project, funded by the France 2030 “Health Impact” program, aims to develop therapeutic antibodies targeting bacteria […]

Pierre MILPIED
Project
2025
Regulation of inflammation by the neurokine TAFA4

We have demonstrated that the neurokine TAFA4, produced by sensory neurons in the skin, can promote tissue repair […]

Sophie UGOLINI
Project
2025
IMAGINe – High Risk High Gain IMAGINe (France)

Targeting intratumor metabolic heterogeneity in neuroblastoma to develop innovative treatments (IMAGINe) Type: National.Duration: 2024–2029 (48 months).Partners & funding amounts: CRCM […]

Rafael J ARGUELLO
Project
2025
South-ROCK – SIRIC

South-Research On Cancer for Kids. INCA Pediacriex (France) Type: National (integrated cancer site).Full title & acronym: South-Research On Cancer for […]

Rafael J ARGUELLO
Project
2025
Biomarkers established to stratify sepsis long-term adverse effects to improve patients' survivorship (BEATsep)

Full title & acronym: Biomarkers established to stratify sepsis long-term adverse effects to improve patients' survivorship (BEATsep).Duration: 2024–2029 (60 months).Partners […]

Rafael J ARGUELLO
Project
2025
MetaNiche (Spatial-SCENITH) Metabolic niches regulate hematopoiesis (MetaNiche, ANR-22-CE15-0015-02).

Bone marrow metabolic niches regulate hematopoiesis (MetaNiche, ANR-22-CE15-0015-02). Duration: 2023–2027 (42 months).Partners & funding amounts: Institut Curie (L. Perié), Institut […]

Rafael J ARGUELLO
Project
2025
Epic-SCENITH: regulators of metabolism and epigenetics in glioblastoma-associated myeloid cells

Duration: 2021–2025.Partners & funding amounts: APHM/La Timone (E. Tabouret); amount for team: 325 k€.Responsibilities: PI–coordinator (only beneficiary)Theme & content of […]

Rafael J ARGUELLO
Project
2025
UNLIMITED – MSCA doctoral network UNLIMITED (Europe)

Full title & acronym: Understanding lipid immunometabolism to treat disease (UNLIMITED).Duration: 2025–2029 (48 months).Partners & funding amounts: Consortium led by […]

Rafael J ARGUELLO
Project
2025
TALETE (Transcan-3 ERA-NET, Europe)

Targeting acute myeloid leukemia immunosuppressive microenvironment by combined IDO1 inhibition and PD-1 blockade Type: European.Duration: 2023–2027 (36 months).Partners & funding […]

Rafael J ARGUELLO
Project
2025
MARCH-I dependent ubiquitination in innate and adaptive immunity: from characterization to manipulation.

CNRS – University of Melbourne Graduate Research Projects The project investigates the molecular interplay between the E3-ubiquitin ligase MARCH1 and […]

Evelina GATTI
Project
2025
SensoSkin

Project: SensoSkin Apical extracellular matrix (aECM) shapes and protects the epithelium in all organisms. We previously showed that like […]

Nathalie PUJOL
Project
2025
Neuroimmune regulations in obesity and type 2 diabetes

Project: T2DRGMacPain Obesity is a major factor in metabolic disorders such as type 2 diabetes. Dysfunction of […]

Guillaume HOEFFEL
Project
2025
Neuroimmune interactions in cancer

Nerve fibers are increasingly emerging as key players in the tumor microenvironment, capable of modulating […]

Vincent FEUILLET
Project
2025
Neuroimmune regulations and viral infection

The host response to pathogens is orchestrated by the immune system and the nervous system, both present in […]

Sophie UGOLINI
Project
2025
Respective immune inductive functions of epithelial tuft and M cells in relation to the gut-associated lymphoid tissue (PPTuft)

Project: PPTuft This project coordinated by Philippe Jay (IGF, Montpellier) in partnership with our team aims to determine the […]

Hugues LELOUARD
Project
2025
From HSC to macrophages and back

Project: HematoMaf Although hematopoietic stem cells (HSCs) have been used in cell therapy in humans for over 40 years, […]

Sandrine SARRAZIN
Project
2025
International Research Project: Therapeutic role of macrophages in oncology and regeneration

Project: CureMAC This Franco-German research project, coordinated by Sandrine Sarrazin, combines the expertise of her group with that of the teams […]

Sandrine SARRAZIN
Project
2025
Understanding the functional impact of eif2ak mutants in dendritic cells and interferonopathies

The integrated stress response (ISR) is a cellular pathway activated by various biochemical triggers. It reduces global protein synthesis while […]

Philippe PIERRE
Project
2025
Endopos

Project: EndoPos The EndoPos project explores the role of the GDPD2 enzyme, produced in particular by pulp fibroblasts […]

Marc BAJENOFF
Project
2025
T-Mac 

Project: T-MAC The T-MAC project aims to understand how testicular macrophages and their niches contribute to the maintenance of […]

Marc BAJENOFF
Project
2025
Path Finder

Project: Path Finder This project aims to characterize the spatio-temporal development of type I dendritic cells (cDC1) in […]

Marc BAJENOFF
Project
2025
NICHE

Project: NICHE The NICHE project explores the concept that macrophages (Macs) depend on local niches formed by […]

Marc BAJENOFF
Project
2025
Myfunbat

Project: Myfunbat The project aims to define the diversity and functions of brown adipose tissue (BAT) macrophages, […]

Marc BAJENOFF
Project
2025
Identification of oncogenic dependencies and response mechanisms to targeted therapies in B-cell lymphomas

In order to identify new therapeutic combinations and understand the mechanisms of resistance to targeted therapies in lymphoid-derived hemopathies […]

Sandrine ROULLAND
Project
2025
LYMPHOMATLAS: an atlas of B-cell lymphomas at the single-cell level

Project: LYMPHOMATLAS Single-cell multi-omic studies in B-lymphomas have highlighted a […]

Sandrine ROULLAND
Pierre MILPIED
Project
2025
CPC_profile: Characterization and Targeting of Cancer Precursor Cells (CPC) at the origin of relapses in B-cell lymphomas 

The progression of follicular lymphoma is marked by iterative cycles of remission and relapse, the latter usually resulting from the […]

Sandrine ROULLAND
Project
2025
HSC-Immunobiography

Project: HSC-Immunobiography My goal is to understand how inflammatory stresses encountered during an individual's life […]

Berengere DE LAVAL
Project
2025
CARCINOMAC

Project: CARCINOMAC Head and neck cancers are the sixth most common type of cancer. Among these, the Oral Squamous […]

Johnny BONNARDEL
Project
2025
HOMEOSTASIS

Project: HOMEOSTASIS HOMEOSTASIS explores how host–commensal interactions preserve tissue equilibrium. Using a model of long-term, inflammation-free oral colonization by […]

Johnny BONNARDEL
Project
2025
Role of Border-Associated Macrophages in Adult Neurocognition

Project: CNSentinels Our research focuses on meningeal macrophages and their roles in health and disease. We found that meningeal […]

Rejane RUA
Project
2025
Role of Border-Associated Macrophages in meningioma and stroke

Project: DeCoDis In the context of a European consortium, we are investigating the dynamics and function of border-associated macrophages […]

Rejane RUA
Project
2025
Intracellular Carriers Against Resistant microOrganisms (ICARO)

Project: ICARO Current acellular vaccines are mostly effective against extracellular pathogens, but fail to induce a response […]

Hugues LELOUARD
Cyrille MIONNET
Project
2025
Type IlI Interferons, master regulator of mucosal homeostasis. – INTERMUCOSAL

Project: INTERMUCOSAL This project explores the role of an immune system molecule called type III interferon (IFN-λ). This […]

Sarah WURBEL
Chloé RIQUIER
Virginie MILLET
Project
2025
Role of plasmacytoid dendritic cells in disease-associated behavior (DC) induced during viral infections or obesity (pDCComp)

Project: pDCComp Individuals infected with viruses or suffering from inflammatory diseases develop a set of behavioral disorders […]

Elena TOMASELLO
Project
2025
DECrypting of the Tissue Instruction of Plasmacytoid Dendritic Cells in Homeostasis and Viral Infections (DECITIP)

Project: DECITIP Plasmacytoid dendritic cells (pDCs) excel in the production of type I and III interferons (IFN), […]

Elena TOMASELLO
Pierre MILPIED
Project
2025
To determine how dendritic cells promote effective anti-tumor NK and CD8 T responses in mouse models of breast cancer, spontaneously or in response to adjuvant administration

Project: ACLAMADABREC Partly through their effectiveness in activating natural killer (NK) cells and CD8 T lymphocytes […]

Marc DALOD
Project
2025
Contributions of non-coding genome-derived antigens to anti-tumor immune responses.

Project: PLBIO-25 Coordinator: Marianne BURBAGE, Institut Curie, Paris. Other participant: Andrew GRIFFITHS, ESPCI, Paris. The effectiveness of CD8 T lymphocytes […]

Nathalie AUPHAN-ANEZIN, PhD, HDR
Project
2025
Deciphering early immune surveillance mechanisms in dendritic cells during breast cancer development using a unique organoid-based transplantable spontaneous sporadic breast tumor model

Project: PLBIO 2021 Coordinator: Christophe CAUX, CRCL, Lyon. Other participants: Alain Viari, Inria, Lyon; Nathalie Bendriss-Vermare, CRCL, Lyon. How […]

Marc DALOD
Project
2025
Improving ex vivo pulmonary perfusion by negative pressure ventilation and graft mobilization – REVOLUTION

Project: REVOLUTION Coordinator: Edouard Sage, Foch Hospital, Suresnes. Other partners: Isabelle Schwartz-Cornil, INRAE, Jouy-en-Josas; Jérémie Pourchez, Ecole des Mines […]

Marc DALOD
Project
2025
Computational deciphering and mathematical modeling of regulatory networks controlling plasmacytoid dendritic cell biology

Project: MITI Other participants: Magali Richard, LIG, Grenoble; Lionel Spinelli, CB2M hub of CIML. Summary: This project aims to […]

Marc DALOD
Project
2025
Role of interactions with dendritic cells in maintaining NK cell functions in tumor conditions

Project: PLBIO 2024 Coordinator: Thierry Walzer, CIRI, Lyon. Other participant: Nathalie Bendriss-Vermare, CRCL, Lyon. Abstract: Natural Killer cells […]

Marc DALOD
Project
2025
Accelerating our ability to understand and combat immunopathology caused by respiratory infections due to emerging viruses: from mouse models to patients to macaques

Project: UNFIRE Other participants: Ciphe (Ana Zarubica), Hospices Civils de Lyon and CIRI (Sophie Trouillet-Assant, Thierry Walzer), CoVir team […]

Marc DALOD
Marc BAJENOFF
Rejane RUA
Mauro GAYA
Philippe PIERRE
Project
2025
A novel genetic screening approach to identify regulators of the biology of different types of human dendritic cells

Project: DCFUNDEVSCREEN Abstract: Studies in mice have shown the key antiviral/tumor role of plasmacytoid dendritic cells (pDCs) […]

Marc DALOD
Project
2025
Discovery of a novel TSLP-induced regulatory axis in the pathogenesis of inflammatory skin diseases

Project: NRegSkin Project leader: Mei LI (IGBMC, Strasbourg). Other participants: Katia Boniface, Julien Seneschal (University of Bordeaux). Summary: The skin […]

Marc DALOD
Project
2025
Role of type I interferons and plasmacytoid dendritic cells in pulmonary immunopathology caused by respiratory viral infections

Project: RIPIREVI Other participants: CIPHE (Ana Zarubica and colleagues). Abstract: Type I interferons (IFN-Is) are essential for […]

Marc DALOD
Rejane RUA
Project
2025
Study of the dissemination of T-ALL leukemias

Project: T-ALL Leukemias T-cell acute lymphoblastic leukemia (T-ALL) is an aggressive blood cancer, representing 25% of […]

Magali IRLA
Project
2025
Regulators of Self Antigen Expression in the Thymus: Guardians of Immunological Tolerance – SelfExpress

Project: SelfExpress The thymus plays a critical role in establishing central tolerance by producing a diverse repertoire […]

Magali IRLA
Project
2025
Spatial mapping of gene expression to decipher thymic interactions controlling central immune tolerance

Project: ThymMap T lymphocytes recognize pathogens while being tolerant to our tissues. They differentiate […]

Magali IRLA
Project
2025
Biological and therapeutic roles of TNF members in Tregs: implication in immunotherapy and cell therapy to treat autoimmune diseases – Reality

Project: Reality Foxp3+ regulatory T cells (Tregs) are crucial players in the control of autoimmune and inflammatory diseases […]

Magali IRLA
Project
2025
Treating Breast Cancer

Project: Treating Breast Cancer Breast cancer is the most frequently diagnosed cancer in women in […]

Emilie NARNI-MANCINELLI
Project
2025
The RHU PIONeeR project: Precision Immuno-Oncology for patients with advanced non-small cell lung cancer and resistance to PD-(L)1 ICIs

Project: PIONeeR Lung cancer is the leading cause of cancer death, with more than 1.5 million […]

Eric VIVIER
Pierre MILPIED
Project
2025
Treating Liver Metastases

Project: TREATLIVMETS Liver metastases occur in nearly 50% of cancer patients, particularly in […]

Eric VIVIER
Project
2025
D2OX – Distribution and Dynamics of OXPHOS

Project: D2OX The interdisciplinary D2OX project is divided into three highly interconnected tasks to elucidate how the efficiency of OXPHOS complexes […]

Didier MARGUET
Project
2025
LINkS -Long-range electrodynamic INteractions between proteins

Project: LINkS The LINkS project (EU FET-OPEN) aims to change the paradigms of self-organization of intracellular living matter, […]

Didier MARGUET
Project
2025
The role of the maternal diet in embryonic immune system development

Project: CholControl You are what your mother ate Transgenerational impact of maternal diets via the regulation of RORγt activity […]

Serge VAN DE PAVERT
Project
2025
Investigating the role of endosomal dynamic modulators during immune dysregulation and neurodegenerative pathology – IMPACT Sensors

Project: IMPACT Sensors Other participants: IGBMC, Strasbourg (Nicolas Charlet-Berguerand) and Institut Curie, Paris (Franck Perez). Duration 2025 – […]

Evelina GATTI
Project
2025
Neural control of embryonic lymph node development

Amidex Project: ELNINo We analyze how neuronal signals integrate with immune and stromal programs to orchestrate ganglion organogenesis. In […]

Serge VAN DE PAVERT
Project
2025
Circulating precursors and niche requirements for LysoDC differentiation (LysoDiff)

Our health depends on a delicate balance between immune defense against pathogens and tolerance to […]

Hugues LELOUARD
Marc BAJENOFF